Coronavirus risk – Neela, 9, a lioness at Chennai’s Vandalur Zoo, died of suspected coronavirus infection last week, having suffered nasal discharge the previous day. Since then, samples of nine lions have tested positive at the National Institute of High Security Animal Diseases at Bhopal.
Also last week, a 10-year-old tiger died at Ranchi’s Bhagwan Birsa Biological Park after suffering from fever, zoo sources said. Although a Rapid Antigen Test returned negative, the viscera has been sent to Indian Veterinary Research Institute, Bareilly, while other animals at the zoo are being tested.
So, are lions and tigers particularly vulnerable for the Coronavirus risk?
The defining feature of a coronavirus is the spike protein on its surface. The spike protein initiates infection by binding with a host protein, called ACE2 receptor. Different species express ACE2 to different extents, and this plays a key role in determining how much a species is susceptible to coronavirus infection.
In various studies, domestic cats and their big cousins have been found or estimated to express ACE2 more significantly than many other species. Also, there are similarities in the ACE2 of cats and humans.
What have such studies found with regard to the Coronavirus risk?
STUDY: In December last year, a paper in PLOS Computational Biology looked at the ACE2 receptors of 10 different species and compared their affinity for binding with the virus spike protein. The researchers used computer modelling to test this. They also compared the “codon adaptation index” — which is a measure of how efficiently the virus replicates after entering the cell.
FINDINGS: The most vulnerable species to coronavirus infection, next to humans, are ferrets, followed by cats and civets.
STUDY FINDINGS: Last August, a study in PNAS detailed a genomic analysis of the relative coronavirus risks faced by 410 species. In humans, 25 amino acids of ACE2 are important for the virus to bind with the cell. The researchers used modelling to evaluate how many of these 25 are found in the ACE2 of other species. The more the matches with the human ACE2, the lower the risk of infection.
FINDINGS: At very high risk are primates such as chimpanzee rhesus macaque. At high risk are species such as blue-eyed black lemur. Cats were found to have a medium risk, while dogs had a low risk.